.. |iminuit| image:: _static/iminuit_logo.svg
   :alt: iminuit

|iminuit|
=========

**These docs are for iminuit version:** |release|

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*iminuit* is a Jupyter-friendly Python interface for the *Minuit2* C++ library maintained by CERN's ROOT team.

Minuit was designed to minimise statistical cost functions, for likelihood and least-squares fits of parametric models to data. It provides the best-fit parameters and error estimates from likelihood profile analysis.

- Supported CPython versions: 3.6+
- Supported PyPy versions: 3.6+
- Supported platforms: Linux, OSX and Windows.

The iminuit package comes with additional features:

- Builtin cost functions for statistical fits

  - Binned and unbinned maximum-likelihood
  - Non-linear regression with (optionally robust) weighted least-squares
  - Gaussian penalty terms
  - Cost functions can be combined by adding them: ``total_cost = cost_1 + cost_2``
- Support for SciPy minimisers as alternatives to Minuit's Migrad algorithm (optional)
- Support for Numba accelerated functions (optional)

Checkout our large and comprehensive list of `tutorials`_ that take you all the way from beginner to power user. For help and how-to questions, please use the `discussions`_ on GitHub or `gitter`_.

In a nutshell
-------------

iminuit is intended to be used with a user-provided negative log-likelihood function or least-squares function. Standard functions are included in ``iminuit.cost``, so you don't have to write them yourself. The following example shows how iminuit is used with a dummy least-squares function.

.. code-block:: python

    from iminuit import Minuit

    def cost_function(x, y, z):
        return (x - 2) ** 2 + (y - 3) ** 2 + (z - 4) ** 2

    m = Minuit(cost_function, x=0, y=0, z=0)

    m.migrad()  # run optimiser
    m.hesse()   # run covariance estimator

    print(m.values)  # x: 2, y: 3, z: 4
    print(m.errors)  # x: 1, y: 1, z: 1

Interactive fitting
-------------------

iminuit optionally supports an interactive fitting mode in Jupyter notebooks.

.. image:: _static/interactive_demo.gif
   :alt: Animated demo of an interactive fit in a Jupyter notebook

Partner projects
----------------

* `numba_stats`_ provides faster implementations of probability density functions than scipy, and a few specific ones used in particle physics that are not in scipy.
* `jacobi`_ provides a robust, fast, and accurate calculation of the Jacobi matrix of any transformation function and building a function for generic error propagation.

Versions
--------

**The current 2.x series has introduced breaking interfaces changes with respect to the 1.x series.**

All interface changes are documented in the `changelog`_ with recommendations how to upgrade. To keep existing scripts running, pin your major iminuit version to <2, i.e. ``pip install 'iminuit<2'`` installs the 1.x series.

.. _changelog: https://iminuit.readthedocs.io/en/stable/changelog.html
.. _tutorials: https://iminuit.readthedocs.io/en/stable/tutorials.html
.. _discussions: https://github.com/scikit-hep/iminuit/discussions
.. _gitter: https://gitter.im/Scikit-HEP/iminuit
.. _jacobi: https://github.com/hdembinski/jacobi
.. _numba_stats: https://github.com/HDembinski/numba-stats
.. include:: bibliography.txt

.. toctree::
    :hidden:

    about
    install
    reference
    tutorials
    studies
    faq
    changelog
    benchmark
    contribute
    citation
